| ABE Masato |  |
| Faculty of Culture and Information Science Department of Culture and Information Science | |
| Assistant Professor |
Last Updated :2024/06/04
Researcher Profile and Settings
researchmap
Research Interests
- Mathematical biology
- Complex systems
- Network science
- Complex networks
- Theoretical neuroscience
- Community ecology
- Collective behavior
- Evolutionary dynamics
- Lévy walks
- Data science
- Nonlinear dynamics
- Time-series analysis
Research Areas
- Life sciences / Ecology and environmental science
- Informatics / Soft computing
- Informatics / Sensitivity (kansei) informatics
- Natural sciences / Applied mathematics and statistics
Research Experience
- RIKEN, BTCC, 客員研究員, 2023/02 - Today
- RIKEN, 革新知能統合研究センター, 客員研究員, 2022/07 - Today
- Doshisha University, Faculty of Culture and Information Science, Assistant Professor, 2022/04 - Today
- RIKEN, Advanced Intelligence Project, Research scientist, 2021/04 - 2022/03
- RIKEN, Center for Advanced Intelligence Project, 特別研究員, 2017/12 - 2021/03
- National Institute of Informatics, JST, ERATO 河原林巨大グラフプロジェクト, 特任研究員, 2015/04 - 2017/11
- 日本学術振興会 特別研究員 DC1, 2011/04 - 2014/03
Education
- The University of Tokyo, Graduate School of Arts and Sciences, Department of Multi-Disciplinary Sciences,General Systems Sciences, 2009/04 - 2015/03
- The University of Tokyo, College of Arts and Sciences, 広域システム科学, 2007/04 - 2009/03
- The University of Tokyo, College of Arts and Sciences, 理科二類, 2004/04 - 2007/03
Degree
Association Memberships
Committee Memberships
- Handling Editor, 2022/10 - Today, Population Ecology
- 専門調査員, 2019/04 - Today, 文部科学省 科学技術・学術政策研究所 科学技術予測センター
- 組織委員, 2017/04 - Today, ネットワーク科学研究会
- 大会企画委員会, 2019/04 - 2022/03, 日本生態学会
Awards
- 研究奨励賞
Sep. 2021, 日本数理生物学会 - Poster Award Top5
Nov. 2019, SWARM 2019 - Poster Award Top5
Oct. 2017, SWARM 2017 - ポスター賞
Sep. 2012, 日本数理生物学会 - Excellent Poster Award
Mar. 2012, The 5th EAFES International Congress - 行動分野 ポスター発表 最優秀賞
Mar. 2011, 日本生態学会
Published Papers
- Home-based cognitive intervention through asking robots questions: A randomized controlled trial (Preprint)
Seiki Tokunaga; Takuya Sekiguchi; Kumi Watanabe Miura; Hikaru Sugimoto; Masato S. Abe; Kazuhiro Tamura; Taishiro Kishimoto; Takashi Kudo; Mihoko Otake-Matsuura
JMIR Aging, JMIR Publications Inc., 2024, Scientific journal - Machine learning approach for early onset dementia neurobiomarker using EEG network topology features
Tomasz M. Rutkowski; Masato S. Abe; Tomasz Komendzinski; Hikaru Sugimoto; Stanislaw Narebski; Mihoko Otake-Matsuura
Frontiers in Human Neuroscience, Frontiers Media SA, 17, 16 Jun. 2023, Scientific journal - Facilitative interaction networks in experimental microbial community dynamics
Hiroaki Fujita; Masayuki Ushio; Kenta Suzuki; Masato S. Abe; Masato Yamamichi; Yusuke Okazaki; Alberto Canarini; Ibuki Hayashi; Keitaro Fukushima; Shinji Fukuda; E. Toby Kiers; Hirokazu Toju
Frontiers in Microbiology, Frontiers Media SA, 14, 11 Apr. 2023, Scientific journal - Cognitive Intervention Effects Vary as a Function of Plasma Neurofilament Light Chain Levels: A PICMOR Randomized Controlled Trial
Mihoko Otake-Matsuura; Hikaru Sugimoto; Takuya Sekiguchi; Masato S Abe; Kumi W Miura; Seiki Tokunaga; Shoshin Akamine; Taishiro Kishimoto; Takashi Kudo
medRxiv, Cold Spring Harbor Laboratory, 31 Mar. 2023 - Alternative stable states, nonlinear behavior, and predictability of microbiome dynamics
Hiroaki Fujita; Masayuki Ushio; Kenta Suzuki; Masato S. Abe; Masato Yamamichi; Koji Iwayama; Alberto Canarini; Ibuki Hayashi; Keitaro Fukushima; Shinji Fukuda; E. Toby Kiers; Hirokazu Toju
Microbiome, Springer Science and Business Media LLC, 11(1), 29 Mar. 2023, Scientific journal - Word-producing brain: Contribution of the left anterior middle temporal gyrus to word production patterns in spoken language
Hikaru Sugimoto; Masato S. Abe; Mihoko Otake-Matsuura
Brain and Language, Elsevier BV, 238 105233 - 105233, Mar. 2023, Scientific journal - Metagenomic analysis of ecological niche overlap and community collapse in microbiome dynamics
Hiroaki Fujita; Masayuki Ushio; Kenta Suzuki; Masato S. Abe; Masato Yamamichi; Yusuke Okazaki; Alberto Canarini; Ibuki Hayashi; Keitaro Fukushima; Shinji Fukuda; E. Toby Kiers; Hirokazu Toju
bioRxiv, Cold Spring Harbor Laboratory, 18 Jan. 2023 - Toward comparative collective behavior to discover fundamental mechanisms underlying behavior in human crowds and nonhuman animal groups
Hisashi Murakami; Masato S. Abe; Yuta Nishiyama
Journal of Robotics and Mechatronics, Fuji Technology Press Ltd., 35(4) 922 - 930, 2023, Scientific journal - Cognitive behavioral assistive technology (CBAT) as AI for super aged society
Mihoko Otake-Matsuura; Masato S. Abe; Takuya Sekiguchi; Seiki Tokunaga; Hikaru Sugimoto; Tomasz M. Rutkowski; Kumi Watanabe Miura
Gerontechnology, International Society for Gerontechnology (ISG), 21(s) 1 - 1, 23 Oct. 2022, Scientific journal - Passive BCI Oddball Paradigm for Dementia Digital Neuro-biomarker Elucidation from Attended and Inhibited ERPs Utilizing Information Geometry Classification Approaches
Tomasz M. Rutkowski; Masato S. Abe; Seiki Tokunaga; Hikaru Sugimoto; Tomasz Komendzinski; Mihoko Otake-Matsuura
2022 IEEE International Conference on Systems, Man, and Cybernetics (SMC), IEEE, 09 Oct. 2022, International conference proceedings - Dementia Digital Neuro-biomarker Study from Theta-band EEG Fluctuation Analysis in Facial and Emotional Identification Short-term Memory Oddball Paradigm
Tomasz M. Rutkowski; Masato S. Abe; Seiki Tokunaga; Tomasz Komendzinski; Mihoko Otake-Matsuura
2022 44th Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC), IEEE, 11 Jul. 2022, International conference proceedings - Chemical-Mediated Microbial Interactions Can Reduce the Effectiveness of Time-Series-Based Inference of Ecological Interaction Networks
Kenta Suzuki; Masato S. Abe; Daiki Kumakura; Shinji Nakaoka; Fuki Fujiwara; Hirokuni Miyamoto; Teruno Nakaguma; Mashiro Okada; Kengo Sakurai; Shohei Shimizu; Hiroyoshi Iwata; Hiroshi Masuya; Naoto Nihei; Yasunori Ichihashi
International Journal of Environmental Research and Public Health, MDPI AG, 19(3) 1228 - 1228, 22 Jan. 2022, Scientific journal - Older Adult Mild Cognitive Impairment Prediction from Multiscale Entropy EEG Patterns in Reminiscent Interior Image Working Memory Paradigm
Tomasz M. Rutkowski; Masato S. Abe; Tomasz Komendzinski; Mihoko Otake-Matsuura
2021 43rd Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC), IEEE, 01 Nov. 2021, International conference proceedings - Neurotechnology and AI Approach for Early Dementia Onset Biomarker from EEG in Emotional Stimulus Evaluation Task
Tomasz M. Rutkowski; Masato S. Abe; Mihoko Otake-Matsuura
2021 43rd Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC), IEEE, 01 Nov. 2021, International conference proceedings - Cognitive Intervention Through Photo-Integrated Conversation Moderated by Robots (PICMOR) Program: A Randomized Controlled Trial
Mihoko Otake-Matsuura; Seiki Tokunaga; Kumi Watanabe; Masato S. Abe; Takuya Sekiguchi; Hikaru Sugimoto; Taishiro Kishimoto; Takashi Kudo
Frontiers in Robotics and AI, Frontiers Media SA, 8 633076 - 633076, 12 Apr. 2021, Scientific journal - Individual Ants Do Not Show Activity-Rest Rhythms in Nest Conditions
Haruna Fujioka; Masato S. Abe; Yasukazu Okada
Journal of Biological Rhythms, SAGE Publications, 36(3) 297 - 310, 05 Apr. 2021, Scientific journal - Bipartite network analysis of ant-task associations reveals task groups and absence of colonial daily activity
Haruna Fujioka; Yasukazu Okada; Masato S. Abe
Royal Society Open Science, The Royal Society, 8(1) 201637 - 201637, 13 Jan. 2021, Scientific journal - Functional advantages of Lévy walks emerging near a critical point
Masato S. Abe
PNAS, 117(39) 24336 - 24344, Sep. 2020 - Genetic variation and phenotypic plasticity in circadian rhythms in an armed beetle, Gnatocerus cornutus (Tenebrionidae)
Kentarou Matsumura; Masato S Abe; Manmohan D Sharma; David J Hosken; Taishi Yoshii; Takahisa Miyatake
Biological Journal of the Linnean Society, Oxford University Press (OUP), 130(1) 34 - 40, 05 May 2020, Scientific journal - Classifying Mild Cognitive Impairment from Behavioral Responses in Emotional Arousal and Valence Evaluation Task – AI Approach for Early Dementia Biomarker in Aging Societies -
Tomasz M. Rutkowski; Masato S. Abe; Marcin Koculak; Mihoko Otake-Matsuura
42nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), IEEE, 2020, International conference proceedings - EEG and fNIRS Biomarkers of Dementia Prediction and Monitoring
Tomasz M. Rutkowski; Masato S. Abe; Mihoko Otake-Matsuura
The 42nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 2020 - Passive BCI for Dementia Onset Detection and Cognitive Intervention Monitoring
Tomasz M. Rutkowski; Masato S. Abe; Mihoko Otake-Matsuura
International Symposium on Artificial Intelligence and Brain Science 2020, 2020 - Scoring species for synthetic community design: network analyses of functional core microbiomes
Hirokazu Toju; Masato S. Abe; Chiharu Ishii; Yoshie Hori; Hiroaki Fujita; Shinji Fukuda
Frontiers in Microbiology, 11 1361 - 1361, 2020, Scientific journal - Optimal random avoidance strategy in prey-predator interactions
Masato S. Abe; Minoru Kasada
bioRxiv, 2020 - Evaluation of Pillbug Phototaxis by using an Omnidirectional Motion Compensation System
Yuki Kawano; Keiichi Otsuki; Masato Abe; Naohisa Nagaya; Shunsuke Shigaki; Ryusuke Fujisawa
Transactions of the Institute of Systems, Control and Information Engineers, 2020 - Cognitive Assessment Estimation from Behavioral Responses in Emotional Faces Evaluation Task -- AI Regression Approach for Dementia Onset Prediction in Aging Societies
Tomasz M. Rutkowski; Masato S. Abe; Marcin Koculak; Mihoko Otake-Matsuura
NeurIPS Joint Workshop on AI for Social Good, 25 Nov. 2019, International conference proceedings - Observation of plugging behaviour reveals entrance-guarding schedule of morphologically specialized caste in Colobopsis nipponicus
Haruna Fujioka; Masato S. Abe; Yasukazu Okada
ETHOLOGY, WILEY, 125(8) 526 - 534, Aug. 2019, Scientific journal - Brain correlates of task-load and dementia elucidation with tensor machine learning using oddball BCI paradigm
Tomasz M. Rutkowski; Marcin Koculak; Masato S. Abe; Mihoko Otake-Matsuura
IEEE International Conference on Acoustics, Speech and Signal Processing, 19 Jun. 2019, International conference proceedings - Ant activity-rest rhythms vary with age and interaction frequencies of workers
Haruna Fujioka; Masato S. Abe; Yasukazu Okada
BEHAVIORAL ECOLOGY AND SOCIOBIOLOGY, SPRINGER, 73(3), Mar. 2019, Scientific journal - Passive BCI for task-load and dementia biomarker elucidation
Tomasz M. Rutkowski; Qibin Zhao; Masato S. Abe; Mihoko Otake-Matsuura
International Conference of the IEEE Engineering in Medicine and Biology Society, 2019, International conference proceedings - AI Neurotechnology for Aging Societies -- Task-load and Dementia EEG Digital Biomarker Development Using Information Geometry Machine Learning Methods
Tomasz M. Rutkowski; Qibin Zhao; Masao S. Abe; Mihoko Otake
NIPS 2018 workshop, 30 Nov. 2018, International conference proceedings - Estimation of personalized value through the analysis of conversational data assisted by coimagination method
Mihoko Otake; Masato S. Abe; Masahiro Nochi; Eiji Shimizu
AAAI 2018 Spring Symposium, 2018, International conference proceedings - Genetic distance and social compatibility in the aggregation behavior of Japanese toad tadpoles
Kazuko Hase; Masato S. Abe; Masakazu Shimada
bioRxiv, 2018 - Anomalous diffusion on the servosphere: A potential tool for detecting inherent organismal movement patterns
Naohisa Nagaya; Nobuaki Mizumoto; Masato S. Abe; Shigeto Dobata; Ryota Sato; Ryusuke Fujisawa
PLoS ONE, 12(6) e0177480 , Jun. 2017, Scientific journal - Optimizing mating encounters by sexually dimorphic movements
Nobuaki Mizumoto; Masato S. Abe; Shigeto Dobata
JOURNAL OF THE ROYAL SOCIETY INTERFACE, ROYAL SOC, 14(130) 20170086 , May 2017, Scientific journal - Ant circadian activity associated with brood care type
Haruna Fujioka; Masato S. Abe; Taro Fuchikawa; Kazuki Tsuji; Masakazu Shimada; Yasukazu Okada
BIOLOGY LETTERS, ROYAL SOC, 13(2) 20160743 , Feb. 2017, Scientific journal - Quantification and Analysis on Animal Social Behavior
Masato S. Abe; Haruna Fujioka
Journal of Robotics Society of Japan, 36(6) 22 - 28, 2017, Scientific journal - Measurement System Based on Robotics for Studies of Insect Behavior
Ryusuke Fujisawa; Nobuaki Mizumoto; Masato Abe; Naohisa Nagaya; Shigeto Dobata
SWARM 2017, 2017, International conference proceedings - Effect of age differences and group size on circadian activity rhythms in queen-less ant Diacamma sp. from Japan
Haruna Fujioka; Masato S. Abe; Yasukazu Okada
SWARM 2017, 2017, International conference proceedings - Sexually differential movement can enhance mating encounters: potential uses of servosphere for detecting intraspecific variations of walking patterns
Nobuaki Mizumoto; Masato S. Abe; Naohisa Nagaya; Ryusuke Fujisawa; Shigeto Dobata
SWARM 2017, 2017, International conference proceedings - Characterizing spontaneous active and inactive patterns in ant individuals
Masato S. Abe; Haruna Fujioka; Yasukazu Okada
SWARM 2017, 2017, International conference proceedings - Does the host's developmental stage affect host preference following an ovipositioning experience in Heterospilus prosopidis?
Koji Sasakawa; Masato S. Abe; Masakazu Shimada
ENTOMOLOGIA EXPERIMENTALIS ET APPLICATA, WILEY, 161(1) 57 - 64, Oct. 2016, Scientific journal - Levy Walks Suboptimal under Predation Risk
Masato S. Abe; Masakazu Shimada
PLOS COMPUTATIONAL BIOLOGY, PUBLIC LIBRARY SCIENCE, 11(11) e1004601 , Nov. 2015, Scientific journal - An introduction to convergent cross mapping: a novel method for causality detection in ecological time series
Shin-Ichiro Nakayama; Masato S. Abe; Hiroshi Okamura; Co-first autho
Japanese Journal of Ecology, 65(3) 241 - 253, 2015, Scientific journal - Tracking movement of individual insects with an omnidirectional treadmill mechanism
Nobuaki Mizumoto; Ryota Sato; Naohisa Nagaya; Masato S. Abe; Shigeto Dobata; Ryusuke Fujisawa
SWARM 2015, 2015, International conference proceedings - Global network structure of dominance hierarchy of ant workers
Hiroyuki Shimoji; Masato S. Abe; Kazuki Tsuji; Naoki Masuda
JOURNAL OF THE ROYAL SOCIETY INTERFACE, ROYAL SOC, 11(99) 20140599 , Oct. 2014, Scientific journal - Multi-stabiliatndy Analytical Results in Double Group Competition Games
Minoru Kasada; Masato S. Abe; Takashi Ikegami
Japan Association of Simulation and Gaming, 日本シミュレーション&ゲーミング学会, 21(1) 52 - 59, 2011
MISC
- オカダンゴムシに走光性はあるのか?-昆虫用運動補償装置を用いた光刺激強度に対する走光性の評価-
川野雄基; 大槻圭一; 阿部真人; 永谷直久; 志垣俊介; 藤澤隆介
日本バーチャルリアリティ学会大会論文集(CD-ROM), 24th, 2019 - 昆虫用バーチャルリアリティ装置を用いた行動軌跡計測-オカダンゴムシを対象とした反走光特性の検証-
大槻圭一; 川野雄基; 阿部真人; 阿部真人; 藤澤隆介; 永谷直久
日本動物行動学会大会発表要旨集, 36th, 2017 - 昆虫搭乗型移動ロボットANTAMによる生物の行動パターンの計測
藤澤隆介; 川野雄基; 大槻圭一; 水元惟暁; 阿部真人; 土畑重人; 永谷直久
計測自動制御学会システム・情報部門学術講演会講演論文集(CD-ROM), 2017, 2017 - 素敵な出会いを応援します:移動パターンの性差がもたらす配偶者探索の最適化
水元惟暁; 土畑重人; 佐藤僚太; 藤澤隆介; 阿部真人; 阿部真人; 永谷直久
日本動物行動学会大会発表要旨集, 34th, 2015
Books etc
- 統計学入門 : 仮説検定から統計モデリングまで重要トピックを完全網羅 : データ分析に必須の知識・考え方
阿部, 真人
ソシム, Nov. 2021, Single work - Python, Rで学ぶデータサイエンス
阿部真人; 西村晃治
東京化学同人, Nov. 2020, Joint translation - Rで学ぶ統計学入門
嶋田正和; 阿部真人
東京化学同人, Jan. 2017, Joint work - 行動生物学辞典
阿部真人
東京化学同人, 2013, Contributor
Presentations
- ランダム探索問題から考える（微）生物が動く意味
阿部真人
微生物が動く意味 第一回領域会議, 25 Jan. 2023, Invited oral presentation - Complex Systems Science toward Human Well-being
Masato S. Abe
First International Workshop on Complex Systems Science & Health Neuroscience, 30 Nov. 2022, Nominated symposium - 集団行動における臨界現象と適応性
阿部真人
日本動物行動学会, 22 Nov. 2022, Public symposium - Random searches underlying biological intelligence
Masato S. Abe
Cellular-level ethological dynamics towards ''proto-intelligence’’, 29 Oct. 2022, Invited oral presentation - Heterogeneity in biological movements : emergence and consequences
Masato S. Abe
Roles of Heterogeneity in Non-equilibrium Collective Dynamics 2022, 16 Sep. 2022, Invited oral presentation - 統計モデルの使い方 -誤った分析・解釈をしないために-
阿部真人
日本数理生物学会 シンポジウム「データ解析の“Tips”」, 05 Sep. 2022, Public symposium - 複雑システムの観点から明らかにする人を含めた生物の行動と社会
阿部真人
理研CBSフォーラム&BTCC講演会, 27 May 2022, Public discourse
Research Projects
- ヒトにおけるレヴィウォークの機能的利点と神経メカニズムの解明
阿部 真人
日本学術振興会, 科学研究費助成事業, 2022/04 -2025/03, 基盤研究(C), 同志社大学 - 自動行動トラッキングシステムを用いたアリ社会の繁殖分業制御機構の解明
下地 博之; 土畑 重人; 三浦 佳二; 水元 惟暁; 阿部 真人
日本学術振興会, 科学研究費助成事業, 2022/04 -2025/03, 基盤研究(B), 関西学院大学 - Quantification of searching behavior in human using virtual reality and prediction of cognitive function
Abe Masato
It is known that the brain exhibits high performance when it is adjusted to a critical point between a stable state and unstable one. In this study, we mathematically revealed that the brain exhibits functional exploratory behavior when its state is adjusted to a critical point, and furthermore, empirical data on human showed that people with higher cognitive function exhibit such exploratory behavior. This finding is expected to provide fundamental insights into the extraction of signals for early detection of cognitive decline and the development of intervention methods to prevent cognitive decline., Japan Society for the Promotion of Science, Grants-in-Aid for Scientific Research, 2018/04 -2022/03, Grant-in-Aid for Early-Career Scientists, Institute of Physical and Chemical Research - How are individuals who do not have biological rhythms in the field adapt to their living environment?
Miyatake Takahisa
Locomotor activities and circadian rhythms of long-reared (more than 35 years) and wild populations of Tribolium castaneum (Coleoptera: Insect) were compared. We found significantly higher percentages of arrhythmic individuals in the long-reared population compared to the population caught in the wild. Only males were compared because no difference between the sexes was found in the percentage of arrhythmic beetles. Next, comparison of the circadian rhythms of wild and long-reared beetle populations showed no significant difference between the populations. The result suggests that the circadian rhythm in T. castaneum has been lost during long-rearing under an artificial condition. We will discuss arrythmicity in organisms., Japan Society for the Promotion of Science, Grants-in-Aid for Scientific Research, 2016/04 -2019/03, Grant-in-Aid for Challenging Exploratory Research, Okayama University - Development of algorithm for quantitative data on animal behavior and analysis on long term behavior
Abe Masato
In this research project, I focused on social insects, Diacamma sp., and constructed an experimental setup that the position and angle of each individual can be observed at 1 frame per second by attaching tags on ant individuals and using tracking software. Then, I revealed how the colony can be integrated and can exhibit collective behavior. Furthermore, I theoretically analyzed searching behavior in animals and clarified the condition for evolution of sexual dimorphism in searching behavior., Japan Society for the Promotion of Science, Grants-in-Aid for Scientific Research, 2015/08 -2017/03, Grant-in-Aid for Research Activity Start-up, National Institute of Informatics
Teaching Experience
- 数理モデル
同志社大学 - ベイズ統計
同志社大学 - 確率統計
同志社大学 - 定量的データ分析演習
同志社大学 - 定量的データ分析
同志社大学 - 微分積分
同志社大学 - Special Lecture on Biological Science
Kyoto University - 計算社会科学
東京大学大学院 工学研究科 - シミュレーション技法
静岡大学大学院 - Experimental design for agriculture and statistical analysis practice II
Tokyo University of Agriculture and Technology - Biostatistics
International Christian University